学科分类
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1 个结果
  • 简介:Microsatellitesorsimplesequencerepeats(SSRs)havebeenfoundinmostorganismsduringthelastdecade.Sincelarge-scalesequencesarebeinggenerated,especiallythosethatcanbeusedtosearchformicrosatellites,thedevelopmentofthesemarkersisgettingmoreconvenient.KeepingSSRsinviewingtheimportanceoftheapplication,availableCDS(codingsequences)orESTs(expressedsequencetags)ofsomeeukaryoticspecieswereusedtostudythefrequencyanddensityofvarioustypesofmicrosatellites.OnthebasisofsurveyingCDSorESTsequencesamountingto66.6Mbinsilkworm,37.2Mbinfly,20.8Mbinmosquito,60.0Mbinmouse,34.9Mbinzebrafishand33.5MbinCaenorhabditiselegans,thefrequencyofSSRswas1/1.00Kbinsilkworm,1/0.77Kbinfly,1/1.03Kbinmosquito,1/1.21Kbinmousey1/1.25Kbinzebrafishand1/1.38KbinC.Elegans.TheoverallaverageSSRfrequencyofthesespeciesis1/1.07Kb.Hexanucleotiderepeats(64.5%-76.6%)arethemostabundantclassofSSRintheinvestigatedspecies,followedbytrimeric,dimeric,tetrameric,monomericandpentamericrepeats.Furthermore,theA-richrepeatsarepredominantineachtypeofSSRs,whereasG-richrepeatsarerareinthecodingregions.

  • 标签: 微卫星 频率 密度 真核细胞生物 染色体组 分子标记